- Predicted Gene MLOC_53469
MLOC_53469 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53469_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53469_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 30.7738 | 28.7728 | 23.0425 | 26.6443 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 457.335 | 824.844 | 1128.68 | 576.796 |
INF1 | Young developing inflorescences (5mm) | 23.3053 | 18.8601 | 25.4703 | 19.7234 |
INF2 | Developing inflorescences (1-1.5 cm) | 12.0539 | 13.9292 | 17.4983 | 15.9856 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.6145 | 5.63275 | 11.3624 | 6.24032 |
NOD | Developing tillers at six leaf stage, 3rd internode | 293.991 | 311.597 | 440.664 | 729.142 |
CAR5 | Developing grain, bracts removed (5 DPA) | 110.209 | 140.348 | 116.715 | 124.291 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.0643 | 15.7235 | 15.0091 | 35.3214 |
CDS Structure of MLOC_53469
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53469.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g48630.2 |
+1 |
3e-56 |
182 |
124/143 (87%) |
13105.m05182 protein expressed protein |
TAIR PP10 |
AT1G52230.1 |
+1 |
9e-43 |
146 |
94/145 (65%) |
| Symbols: PSAH2, PSAH-2, PSI-H | photosystem I subunit H2 | chr1:19454902-19455508 FORWARD LENGTH=145 |