MLOC_53439 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.97700302.05797
LEAShoots from the seedlings (10 cm shoot stage)0000.380405
INF1Young developing inflorescences (5mm)1.03156001.26155
INF2Developing inflorescences (1-1.5 cm)01.031420.8307122.01454
ROORoots from the seedlings (10 cm shoot stage)0000.297039
NODDeveloping tillers at six leaf stage, 3rd internode0.8949990.3635040.2778891.05664
CAR5Developing grain, bracts removed (5 DPA)0.9007630.8362290.842911.26158
CAR15Developing grain, bracts removed (15 DPA)0.312010.37074301.89553



CDS Structure of MLOC_53439






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53439.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_53439.1CUST_7518_PI427708083AvailableAvailablecontig_383715 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g47820.2 -3 9e-17 75 36/43 (84%) 13107.m05108 protein acyl-CoA dehydrogenase family member 10, putative, expressed
TAIR PP10None-----