- Predicted Gene MLOC_53435
MLOC_53435 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 13.0639 | 13.5361 | 12.9271 | 12.138 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 12.3811 | 9.5522 | 9.33497 | 8.50453 |
| INF1 | Young developing inflorescences (5mm) | 52.7538 | 58.2325 | 55.4026 | 42.0186 |
| INF2 | Developing inflorescences (1-1.5 cm) | 44.6041 | 47.2815 | 43.0453 | 45.3248 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.07748 | 13.5747 | 9.17256 | 13.0353 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.34851 | 3.26249 | 9.45781 | 13.2025 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 23.7265 | 22.2299 | 23.3796 | 19.823 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.13146 | 5.6549 | 4.67234 | 11.7315 |
CDS Structure of MLOC_53435
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53435.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g39210.1 |
+2 |
0.0 |
909 |
480/637 (75%) |
13109.m03926 protein nuclear pore protein-like, putative, expressed |
| TAIR PP10 |
AT5G40480.1 |
+2 |
5e-130 |
427 |
264/640 (41%) |
| Symbols: EMB3012 | embryo defective 3012 | chr5:16213361-16223982 FORWARD LENGTH=1923 |