- Predicted Gene MLOC_53422
MLOC_53422 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.151475 | 0.193315 | 0 | 0.245959 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.177374 | 0.0531047 | 0 | 0.155394 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.142352 | 0.149563 | 0 | 0.258797 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.04248 | 0 | 0.0385862 | 0.0450829 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.72431 | 8.95112 | 4.53946 | 7.50526 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 361.09 | 383.71 | 391.416 | 1039.29 |
CDS Structure of MLOC_53422
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53422.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g36170.1 |
+1 |
3e-23 |
93 |
37/66 (56%) |
13110.m03268 protein LTPL160 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
| TAIR PP10 |
AT5G38170.1 |
+1 |
4e-20 |
84 |
34/66 (52%) |
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:15227717-15228028 FORWARD LENGTH=103 |