- Predicted Gene MLOC_53405
MLOC_53405 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53405_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.73102 | 12.2708 | 10.9846 | 10.4224 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.98967 | 4.94698 | 3.19277 | 5.22848 |
INF1 | Young developing inflorescences (5mm) | 28.8718 | 25.502 | 23.3521 | 22.3593 |
INF2 | Developing inflorescences (1-1.5 cm) | 27.0359 | 30.539 | 23.4444 | 31.4281 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.27291 | 6.47456 | 3.76211 | 7.54292 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.0572 | 9.38966 | 5.10296 | 32.2191 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.9022 | 10.164 | 12.3399 | 11.481 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.3707 | 7.95731 | 9.18049 | 20.2395 |
CDS Structure of MLOC_53405
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53405.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g06980.1 |
+3 |
6e-73 |
274 |
302/1025 (29%) |
13112.m00723 protein SAP domain containing protein, expressed |
TAIR PP10 | None | - | - | - | - | - |