MLOC_53348 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1465350.4354820.5853360.385378
LEAShoots from the seedlings (10 cm shoot stage)0.3758050.6077260.6651380.485865
INF1Young developing inflorescences (5mm)1.705871.648231.393931.28328
INF2Developing inflorescences (1-1.5 cm)5.877965.180293.836785.46801
ROORoots from the seedlings (10 cm shoot stage)0.1149280.2845710.2269040.320356
NODDeveloping tillers at six leaf stage, 3rd internode0.01212270.009095240.01100330.0350834
CAR5Developing grain, bracts removed (5 DPA)8.130118.613858.817078.04638
CAR15Developing grain, bracts removed (15 DPA)3.124933.563093.203267.05096



CDS Structure of MLOC_53348






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53348.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_53348.1CUST_13057_PI427708080AvailableAvailablecontig_38280 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g41610.1 +1 3e-66 242 175/449 (39%) 13102.m04592 protein expressed protein
TAIR PP10None-----