- Predicted Gene MLOC_53348
MLOC_53348 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53348_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53348_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.146535 | 0.435482 | 0.585336 | 0.385378 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.375805 | 0.607726 | 0.665138 | 0.485865 |
INF1 | Young developing inflorescences (5mm) | 1.70587 | 1.64823 | 1.39393 | 1.28328 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.87796 | 5.18029 | 3.83678 | 5.46801 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.114928 | 0.284571 | 0.226904 | 0.320356 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0121227 | 0.00909524 | 0.0110033 | 0.0350834 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.13011 | 8.61385 | 8.81707 | 8.04638 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.12493 | 3.56309 | 3.20326 | 7.05096 |
CDS Structure of MLOC_53348
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53348.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g41610.1 |
+1 |
3e-66 |
242 |
175/449 (39%) |
13102.m04592 protein expressed protein |
TAIR PP10 | None | - | - | - | - | - |