- Predicted Gene MLOC_53327
MLOC_53327 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53327_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53327_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 11.6595 | 10.5555 | 10.3973 | 15.2974 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.29393 | 8.68726 | 9.33796 | 10.4233 |
INF1 | Young developing inflorescences (5mm) | 15.3434 | 12.8334 | 11.3439 | 13.9622 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.7414 | 12.2473 | 12.9503 | 17.8487 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.84915 | 12.2588 | 14.3837 | 24.6941 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.69718 | 1.99995 | 7.70357 | 13.7999 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.3683 | 14.0914 | 13.3625 | 18.9616 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.64665 | 8.55251 | 5.28933 | 22.6388 |
CDS Structure of MLOC_53327
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53327.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g30880.1 |
+2 |
8e-106 |
329 |
260/366 (71%) |
13105.m03166 protein nucleolar matrix protein-related, putative, expressed |
TAIR PP10 |
AT5G05210.2 |
+2 |
8e-31 |
124 |
107/228 (47%) |
Surfeit locus protein 6 | chr5:1548398-1549534 FORWARD LENGTH=378 |