MLOC_53307 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8772020.7591690.6223940.765538
LEAShoots from the seedlings (10 cm shoot stage)0.5323380.596622.389760.980274
INF1Young developing inflorescences (5mm)0.1402880.2254920.1170880.160477
INF2Developing inflorescences (1-1.5 cm)0.1044040.02511980.1491250.107284
ROORoots from the seedlings (10 cm shoot stage)2.83121.618272.184362.03622
NODDeveloping tillers at six leaf stage, 3rd internode0.05844310.1613580.2762680.532742
CAR5Developing grain, bracts removed (5 DPA)0.1924760.06123220.1175240.140414
CAR15Developing grain, bracts removed (15 DPA)0.02042350.073071200.172024



CDS Structure of MLOC_53307






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53307.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_53307.1CUST_13053_PI427708080AvailableAvailablecontig_38236 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g47770.1 +3 4e-156 456 258/400 (65%) 13104.m04847 protein cis-zeatin O-glucosyltransferase, putative, expressed
TAIR PP10 AT2G15490.3 +3 1e-45 167 105/294 (36%) | Symbols: UGT73B4 | UDP-glycosyltransferase 73B4 | chr2:6761750-6763398 FORWARD LENGTH=481