MLOC_53279 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.16622.629183.040572.64746
LEAShoots from the seedlings (10 cm shoot stage)2.321081.562282.490111.67751
INF1Young developing inflorescences (5mm)3.760794.767014.107633.8138
INF2Developing inflorescences (1-1.5 cm)5.189065.877824.262336.06659
ROORoots from the seedlings (10 cm shoot stage)2.83942.463331.754452.78374
NODDeveloping tillers at six leaf stage, 3rd internode1.188822.188572.236696.11281
CAR5Developing grain, bracts removed (5 DPA)5.379094.515714.172374.98404
CAR15Developing grain, bracts removed (15 DPA)1.831931.875331.81494.82157



CDS Structure of MLOC_53279






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374036
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374036CUST_25819_PI427708080NoneNoneNone
MLOC_47839.1NoneAvailableNonecontig_313105 (Not mapped)
MLOC_53279.1NoneAvailableAvailablecontig_38200 (Mapped)
MLOC_8646.2NoneAvailableNonecontig_145061 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----