- Predicted Gene MLOC_53258
MLOC_53258 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53258_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53258_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.36471 | 5.71596 | 6.87397 | 4.79143 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 248.491 | 448.56 | 454.771 | 261.225 |
INF1 | Young developing inflorescences (5mm) | 10.9336 | 8.28759 | 11.0076 | 7.44762 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.63968 | 10.5809 | 14.6981 | 10.068 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.458195 | 2.06521 | 7.49151 | 2.15811 |
NOD | Developing tillers at six leaf stage, 3rd internode | 239.695 | 101.362 | 230.823 | 310.738 |
CAR5 | Developing grain, bracts removed (5 DPA) | 58.6955 | 68.267 | 70.6613 | 53.025 |
CAR15 | Developing grain, bracts removed (15 DPA) | 17.0511 | 18.3387 | 18.6328 | 36.4132 |
CDS Structure of MLOC_53258
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53258.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g23200.1 |
+2 |
4e-117 |
364 |
189/209 (90%) |
13112.m02357 protein photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT4G12800.1 |
+2 |
2e-84 |
275 |
152/217 (70%) |
| Symbols: PSAL | photosystem I subunit l | chr4:7521469-7522493 FORWARD LENGTH=219 |