- Predicted Gene MLOC_53255
MLOC_53255 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53255_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53255_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.95897 | 7.77628 | 6.53079 | 8.60243 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.51766 | 5.03568 | 8.85138 | 7.1149 |
INF1 | Young developing inflorescences (5mm) | 12.9678 | 12.9939 | 15.1697 | 12.6352 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.8158 | 17.4489 | 15.3166 | 19.308 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.42881 | 8.23733 | 5.2349 | 10.9488 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.83397 | 7.95243 | 8.36244 | 30.3093 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.2921 | 12.704 | 11.7924 | 12.3478 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.177 | 10.3024 | 10.5237 | 26.061 |
CDS Structure of MLOC_53255
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53255.7
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g46710.1 |
+3 |
3e-74 |
253 |
186/423 (44%) |
13101.m04803 protein transposon protein, putative, CACTA, En/Spm sub-class, expressed |
TAIR PP10 | None | - | - | - | - | - |