MLOC_53238 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.593813.277310.837516.1679
LEAShoots from the seedlings (10 cm shoot stage)8.139512.522391.991443.96395
INF1Young developing inflorescences (5mm)43.240446.869548.40146.7366
INF2Developing inflorescences (1-1.5 cm)39.606357.902940.423465.6008
ROORoots from the seedlings (10 cm shoot stage)6.5233612.004510.657418.3612
NODDeveloping tillers at six leaf stage, 3rd internode2.445035.415716.5473124.5339
CAR5Developing grain, bracts removed (5 DPA)12.267113.878614.278517.0136
CAR15Developing grain, bracts removed (15 DPA)4.412243.522725.3361711.7726



CDS Structure of MLOC_53238






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK358898
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358898CUST_20030_PI427708080NoneNoneNone
MLOC_53238.2NoneAvailableAvailablecontig_38173 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----