- Predicted Gene MLOC_53224
MLOC_53224 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53224_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53224_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 287.112 | 164.582 | 172.203 | 196.347 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 64.1879 | 61.4675 | 98.1609 | 60.8509 |
INF1 | Young developing inflorescences (5mm) | 58.5966 | 76.1131 | 85.1821 | 61.1941 |
INF2 | Developing inflorescences (1-1.5 cm) | 58.2555 | 52.0899 | 49.3529 | 60.4135 |
ROO | Roots from the seedlings (10 cm shoot stage) | 326.419 | 146.303 | 142.287 | 199.304 |
NOD | Developing tillers at six leaf stage, 3rd internode | 93.3859 | 84.9403 | 63.2367 | 245.203 |
CAR5 | Developing grain, bracts removed (5 DPA) | 54.1583 | 69.607 | 62.6256 | 64.2072 |
CAR15 | Developing grain, bracts removed (15 DPA) | 13.2132 | 11.9128 | 13.0088 | 29.6923 |
CDS Structure of MLOC_53224
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53224.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g21470.1 |
+1 |
1e-28 |
104 |
53/65 (82%) |
13109.m02055 protein expressed protein |
TAIR PP10 |
AT3G47833.1 |
+1 |
6e-20 |
81 |
39/58 (67%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62575.2); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:17648721-17649829 FORWARD LENGTH=93 |