- Predicted Gene MLOC_53215
MLOC_53215 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53215_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53215_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 28.3115 | 27.568 | 29.803 | 30.1505 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 20.5745 | 3.13427 | 6.97271 | 9.16444 |
INF1 | Young developing inflorescences (5mm) | 30.0026 | 28.5954 | 29.7299 | 25.368 |
INF2 | Developing inflorescences (1-1.5 cm) | 33.2934 | 38.8653 | 34.3239 | 39.6944 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.5739 | 21.4688 | 18.3465 | 26.4014 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.72772 | 9.66212 | 4.42582 | 27.0458 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.4721 | 18.4008 | 18.0493 | 17.3572 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.01138 | 7.79812 | 7.97088 | 18.7759 |
CDS Structure of MLOC_53215
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53215.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g71200.1 |
+2 |
0.0 |
658 |
363/426 (85%) |
13101.m07753 protein RNA recognition motif containing protein, putative, expressed |
TAIR PP10 |
AT4G03110.1 |
+2 |
1e-149 |
442 |
268/431 (62%) |
| Symbols: AtRBP-DR1, RBP-DR1 | RNA-binding protein-defense related 1 | chr4:1376612-1379275 REVERSE LENGTH=441 |