MLOC_53211 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains594.973415.315449.601457.745
LEAShoots from the seedlings (10 cm shoot stage)206.25131.043189.033142.404
INF1Young developing inflorescences (5mm)221.205210.376224.432179.907
INF2Developing inflorescences (1-1.5 cm)150.346187.324156.166171.404
ROORoots from the seedlings (10 cm shoot stage)462.752356.769273.268396.155
NODDeveloping tillers at six leaf stage, 3rd internode135.993137.957111.618380.879
CAR5Developing grain, bracts removed (5 DPA)258.062267.685267.66241.157
CAR15Developing grain, bracts removed (15 DPA)57.857554.418851.2723123.289



CDS Structure of MLOC_53211






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53211.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249654.1NoneNoneNoneNone
MLOC_53211.1CUST_3070_PI427708080AvailableAvailablecontig_38147 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g52860.1 +1 0.0 582 285/313 (91%) 13102.m06025 protein phosphate carrier protein, mitochondrial precursor, putative, expressed
TAIR PP10 AT5G14040.1 +1 0.0 550 265/310 (85%) | Symbols: PHT3;1 | phosphate transporter 3;1 | chr5:4531059-4532965 REVERSE LENGTH=375