MLOC_53177 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.988283.622745.277173.25599
LEAShoots from the seedlings (10 cm shoot stage)4.03933.567383.628132.40114
INF1Young developing inflorescences (5mm)8.735447.404838.790024.95128
INF2Developing inflorescences (1-1.5 cm)7.274846.466189.022485.98718
ROORoots from the seedlings (10 cm shoot stage)3.471443.646335.407993.19505
NODDeveloping tillers at six leaf stage, 3rd internode2.803992.258752.62085.93394
CAR5Developing grain, bracts removed (5 DPA)6.991944.929697.107944.36552
CAR15Developing grain, bracts removed (15 DPA)2.943092.088642.440224.08037



CDS Structure of MLOC_53177






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53177.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_53177.1CUST_7490_PI427708083AvailableAvailablecontig_38116 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g45300.1 -3 7e-28 119 113/186 (61%) 13103.m04879 protein transposon protein, putative, unclassified, expressed
TAIR PP10None-----