- Predicted Gene MLOC_53175
MLOC_53175 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 298.229 | 387.946 | 353.328 | 370.04 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 290.581 | 148.347 | 151.399 | 172.862 |
| INF1 | Young developing inflorescences (5mm) | 119.1 | 106.23 | 95.7016 | 93.9371 |
| INF2 | Developing inflorescences (1-1.5 cm) | 86.0677 | 99.4862 | 92.9892 | 105.239 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 475.868 | 448.717 | 269.468 | 536.437 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 744.752 | 811.513 | 583.346 | 2477.75 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 219.757 | 215.542 | 221.929 | 219.997 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 25.0904 | 23.8718 | 24.5636 | 56.9134 |
CDS Structure of MLOC_53175
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53175.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g42876.1 |
-3 |
0.0 |
1340 |
719/766 (94%) |
13112.m22136 protein 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed |
| TAIR PP10 |
AT5G17920.2 |
-3 |
0.0 |
1256 |
671/766 (88%) |
| Symbols: ATCIMS | Cobalamin-independent synthase family protein | chr5:5935771-5939195 FORWARD LENGTH=765 |