MLOC_53166 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains000.7570750
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.8377360.4737951.091520
INF2Developing inflorescences (1-1.5 cm)0.4378710.4151111.036020
ROORoots from the seedlings (10 cm shoot stage)00.63092300
NODDeveloping tillers at six leaf stage, 3rd internode0.3669031.339552.222520
CAR5Developing grain, bracts removed (5 DPA)0.53090801.024490
CAR15Developing grain, bracts removed (15 DPA)00.44221400



CDS Structure of MLOC_53166






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364613
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364613CUST_24796_PI427708080NoneNoneNone
MLOC_31219.2NoneAvailableAvailablecontig_216811 (Mapped)
MLOC_53166.1NoneAvailableNonecontig_381105 (Mapped)
MLOC_75657.1NoneAvailableNonecontig_68539 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----