MLOC_53162 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.36824.838529.200921.4469
LEAShoots from the seedlings (10 cm shoot stage)36.509136.92837.681329.8446
INF1Young developing inflorescences (5mm)11.461913.662413.20569.32054
INF2Developing inflorescences (1-1.5 cm)11.05310.80310.551210.5794
ROORoots from the seedlings (10 cm shoot stage)15.167921.148618.163722.3739
NODDeveloping tillers at six leaf stage, 3rd internode27.836529.74524.761795.1168
CAR5Developing grain, bracts removed (5 DPA)16.846514.334314.965613.0916
CAR15Developing grain, bracts removed (15 DPA)5.965327.302649.0304213.3938



CDS Structure of MLOC_53162






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK370601
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370601CUST_21978_PI427708080NoneNoneNone
MLOC_53162.5NoneAvailableAvailablecontig_38103 (Mapped)
MLOC_66494.2NoneAvailableNonecontig_51642 (Mapped)
MLOC_81073.1NoneAvailableNonecontig_9431 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----