MLOC_53161 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.2399611.722440
LEAShoots from the seedlings (10 cm shoot stage)0.3978381.327070.8122930
INF1Young developing inflorescences (5mm)1.463190.4500910.5406090
INF2Developing inflorescences (1-1.5 cm)1.24720.3395891.820140
ROORoots from the seedlings (10 cm shoot stage)00.52774600
NODDeveloping tillers at six leaf stage, 3rd internode0.1938490.6062980.4754770
CAR5Developing grain, bracts removed (5 DPA)0.43671.398660.465770
CAR15Developing grain, bracts removed (15 DPA)0.445672000



CDS Structure of MLOC_53161






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK354043
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354043CUST_23650_PI427708080NoneNoneNone
MLOC_28564.1NoneAvailableNonecontig_1930120 (Not mapped)
MLOC_32652.1NoneAvailableNonecontig_2306636 (Not mapped)
MLOC_35961.1NoneAvailableNonecontig_252783 (Mapped)
MLOC_53161.1NoneAvailableNonecontig_381012 (Mapped)
MLOC_53226.1NoneAvailableAvailablecontig_38161 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----