MLOC_5316 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_5316_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_5316_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 53.3742 | 47.7175 | 51.9124 | 58.3586 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.81099 | 1.21838 | 2.23261 | 2.31649 |
INF1 | Young developing inflorescences (5mm) | 0.144127 | 0.190424 | 0 | 0.176922 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0.0996564 | 0.119687 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.71157 | 10.2319 | 7.78122 | 14.5841 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.87875 | 1.30921 | 1.07814 | 4.95666 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.27906 | 0.360224 | 0.424758 | 0.456678 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0288063 | 0.0312283 | 0 | 0.107376 |
CDS Structure of MLOC_5316
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5316.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g45070.1 |
-3 |
5e-43 |
153 |
112/148 (76%) |
13104.m04514 protein remorin, putative, expressed |
TAIR PP10 |
AT5G23750.2 |
-3 |
5e-32 |
122 |
94/139 (68%) |
Remorin family protein | chr5:8010004-8011453 REVERSE LENGTH=201 |