MLOC_5315 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.62753 | 8.44725 | 8.19142 | 7.3068 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 70.1225 | 78.6301 | 92.0552 | 64.368 |
| INF1 | Young developing inflorescences (5mm) | 10.6748 | 11.7955 | 14.1898 | 9.23478 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.7763 | 19.7169 | 22.3467 | 19.1606 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.51276 | 13.7536 | 16.7566 | 14.7287 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.80471 | 7.55007 | 14.3234 | 25.8668 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.55823 | 9.06878 | 8.93623 | 7.95376 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.01861 | 4.40334 | 5.86487 | 10.1381 |
CDS Structure of MLOC_5315
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5315.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g08200.1 |
+3 |
0.0 |
578 |
280/329 (85%) |
13107.m00810 protein methyltransferase domain containing protein, putative, expressed |
| TAIR PP10 |
AT3G63410.1 |
+3 |
9e-156 |
459 |
228/296 (77%) |
| Symbols: APG1, VTE3, IEP37, E37 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:23415816-23417002 REVERSE LENGTH=338 |
