MLOC_53147 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0547271000.071014
LEAShoots from the seedlings (10 cm shoot stage)00.091081500.130114
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.07724840.2657070.2003360.220519
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode000.005977330.0145881
CAR5Developing grain, bracts removed (5 DPA)31.311534.608331.75733.5384
CAR15Developing grain, bracts removed (15 DPA)0.3397510.3374670.506640.985544



CDS Structure of MLOC_53147






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53147.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372557NoneNoneNoneNone
MLOC_53147.2CUST_3061_PI427708080AvailableAvailablecontig_38092 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g10240.1 -2 2e-154 461 283/478 (59%) 13107.m01036 protein anthocyanidin 3-O-glucosyltransferase, putative
TAIR PP10 AT5G65550.1 -2 2e-90 293 197/480 (41%) UDP-Glycosyltransferase superfamily protein | chr5:26198410-26199810 REVERSE LENGTH=466