- Predicted Gene MLOC_53144
MLOC_53144 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53144_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53144_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 21.3568 | 18.9801 | 21.1267 | 18.9114 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.9927 | 12.0738 | 19.2274 | 11.193 |
INF1 | Young developing inflorescences (5mm) | 10.5302 | 10.3937 | 9.84489 | 8.70238 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.48618 | 3.39154 | 6.41096 | 4.51111 |
ROO | Roots from the seedlings (10 cm shoot stage) | 40.7012 | 26.4591 | 26.4088 | 28.9965 |
NOD | Developing tillers at six leaf stage, 3rd internode | 16.6315 | 19.0289 | 19.0109 | 50.7674 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.8527 | 5.82599 | 5.36605 | 6.05593 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.76711 | 1.30385 | 1.49042 | 3.55945 |
CDS Structure of MLOC_53144
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53144.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g28000.1 |
-2 |
1e-140 |
422 |
284/418 (68%) |
13109.m02756 protein OsSigP6 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed |
TAIR PP10 |
AT2G30440.1 |
-2 |
1e-84 |
273 |
127/186 (68%) |
| Symbols: TPP | thylakoid processing peptide | chr2:12973244-12975027 FORWARD LENGTH=340 |