MLOC_5314 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.892529.010327.292923.2967
LEAShoots from the seedlings (10 cm shoot stage)32.011225.588625.507322.0983
INF1Young developing inflorescences (5mm)19.258521.543920.018814.9732
INF2Developing inflorescences (1-1.5 cm)22.058824.990823.62823.0326
ROORoots from the seedlings (10 cm shoot stage)21.695632.9420.581432.2492
NODDeveloping tillers at six leaf stage, 3rd internode26.903930.898426.817191.9247
CAR5Developing grain, bracts removed (5 DPA)28.846628.398329.765724.6651
CAR15Developing grain, bracts removed (15 DPA)15.857813.482714.612529.5435



CDS Structure of MLOC_5314






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_5314.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_5314.1CUST_13033_PI427708080AvailableAvailablecontig_136117 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g42439.1 +2 0.0 1467 830/924 (90%) 13110.m03987 protein heat shock protein DnaJ, putative, expressed
TAIR PP10 AT2G26890.1 +2 0.0 1095 633/909 (70%) | Symbols: GRV2, KAM2 | DNAJ heat shock N-terminal domain-containing protein | chr2:11462327-11473841 REVERSE LENGTH=2554