- Predicted Gene MLOC_53134
MLOC_53134 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53134_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53134_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.06234 | 5.46209 | 6.17872 | 6.89353 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.7127 | 18.2577 | 12.6004 | 12.457 |
INF1 | Young developing inflorescences (5mm) | 0.919419 | 1.20972 | 1.2349 | 1.02351 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.733535 | 0.712583 | 1.06737 | 0.945104 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.8799 | 18.9717 | 18.9559 | 22.8574 |
NOD | Developing tillers at six leaf stage, 3rd internode | 66.1586 | 46.3276 | 50.1815 | 132.927 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.14639 | 4.22215 | 4.2203 | 4.39706 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.52847 | 4.8974 | 5.35852 | 13.6039 |
CDS Structure of MLOC_53134
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53134.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g45380.1 |
+2 |
0.0 |
1099 |
505/603 (84%) |
13106.m04781 protein vacuolar-sorting receptor precursor, putative, expressed |
TAIR PP10 |
AT1G30900.1 |
+2 |
0.0 |
840 |
384/603 (64%) |
| Symbols: VSR6, VSR3;3, BP80-3;3 | VACUOLAR SORTING RECEPTOR 6 | chr1:10997275-11000543 FORWARD LENGTH=631 |