MLOC_53134 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.062345.462096.178726.89353
LEAShoots from the seedlings (10 cm shoot stage)13.712718.257712.600412.457
INF1Young developing inflorescences (5mm)0.9194191.209721.23491.02351
INF2Developing inflorescences (1-1.5 cm)0.7335350.7125831.067370.945104
ROORoots from the seedlings (10 cm shoot stage)17.879918.971718.955922.8574
NODDeveloping tillers at six leaf stage, 3rd internode66.158646.327650.1815132.927
CAR5Developing grain, bracts removed (5 DPA)4.146394.222154.22034.39706
CAR15Developing grain, bracts removed (15 DPA)5.528474.89745.3585213.6039



CDS Structure of MLOC_53134






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53134.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360363NoneNoneNoneNone
MLOC_53134.1CUST_3060_PI427708080AvailableAvailablecontig_38082 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g45380.1 +2 0.0 1099 505/603 (84%) 13106.m04781 protein vacuolar-sorting receptor precursor, putative, expressed
TAIR PP10 AT1G30900.1 +2 0.0 840 384/603 (64%) | Symbols: VSR6, VSR3;3, BP80-3;3 | VACUOLAR SORTING RECEPTOR 6 | chr1:10997275-11000543 FORWARD LENGTH=631