MLOC_5313 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_5313_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_5313_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 6.46587 | 39.0986 | 28.998 | 21.8038 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 36.3501 | 29.3367 | 31.3593 | 24.1919 |
INF1 | Young developing inflorescences (5mm) | 24.106 | 20.8807 | 20.0965 | 15.3776 |
INF2 | Developing inflorescences (1-1.5 cm) | 35.9889 | 35.6586 | 31.8277 | 31.7196 |
ROO | Roots from the seedlings (10 cm shoot stage) | 15.0449 | 22.4292 | 17.7556 | 20.0799 |
NOD | Developing tillers at six leaf stage, 3rd internode | 19.0921 | 26.1354 | 14.6335 | 67.0843 |
CAR5 | Developing grain, bracts removed (5 DPA) | 50.6218 | 29.0032 | 38.9562 | 30.1595 |
CAR15 | Developing grain, bracts removed (15 DPA) | 18.436 | 19.9421 | 17.766 | 35.3555 |
CDS Structure of MLOC_5313
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5313.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g42439.1 |
+1 |
7e-42 |
150 |
72/79 (91%) |
13110.m03987 protein heat shock protein DnaJ, putative, expressed |
TAIR PP10 |
AT2G26890.1 |
+1 |
1e-38 |
140 |
65/79 (82%) |
| Symbols: GRV2, KAM2 | DNAJ heat shock N-terminal domain-containing protein | chr2:11462327-11473841 REVERSE LENGTH=2554 |