- Predicted Gene MLOC_53116
MLOC_53116 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53116_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53116_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.17086 | 1.88209 | 1.72451 | 1.68505 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 31.1849 | 50.4266 | 48.8354 | 38.5317 |
INF1 | Young developing inflorescences (5mm) | 2.3802 | 1.99275 | 1.17141 | 1.60092 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.14386 | 1.31854 | 1.34515 | 1.42487 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.280008 | 0.281151 | 0.281996 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.17252 | 6.31231 | 7.6895 | 23.8122 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.90099 | 4.10885 | 3.45441 | 3.87569 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.396798 | 0.541489 | 0.881395 | 1.2765 |
CDS Structure of MLOC_53116
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53116.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g04260.1 |
+1 |
0.0 |
637 |
353/427 (83%) |
13112.m00405 protein astaxanthin synthase KC28, putative |
TAIR PP10 |
AT1G50450.1 |
+1 |
0.0 |
561 |
268/371 (72%) |
Saccharopine dehydrogenase | chr1:18687902-18690348 REVERSE LENGTH=428 |