- Predicted Gene MLOC_53112
MLOC_53112 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.638575 | 1.11394 | 1.06553 | 0.848905 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.00193 | 0.234612 | 0.273777 | 0.42986 |
| INF1 | Young developing inflorescences (5mm) | 1.66337 | 1.34522 | 1.21364 | 1.07382 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.662345 | 1.01097 | 0.858506 | 0.811147 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.333331 | 0.690382 | 0.909247 | 0.671194 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.804139 | 0.830471 | 1.14687 | 2.57153 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.872679 | 1.16741 | 1.46257 | 0.951748 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.227584 | 0.310869 | 0.258386 | 0.524635 |
CDS Structure of MLOC_53112
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53112.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g17510.1 |
-1 |
0.0 |
957 |
469/598 (78%) |
13103.m02089 protein pentatricopeptide, putative, expressed |
| TAIR PP10 |
AT2G37310.1 |
-1 |
3e-166 |
521 |
272/601 (45%) |
Pentatricopeptide repeat (PPR) superfamily protein | chr2:15665102-15667075 REVERSE LENGTH=657 |