- Predicted Gene MLOC_53111
MLOC_53111 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.931638 | 1.38761 | 0.9599 | 1.02322 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.60791 | 0.933011 | 1.64575 | 2.30403 |
| INF1 | Young developing inflorescences (5mm) | 2.15883 | 3.30636 | 2.52087 | 2.36815 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.699498 | 0.997574 | 1.23488 | 1.12992 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.08032 | 2.51872 | 2.73508 | 2.62916 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.28354 | 6.56975 | 2.98497 | 18.9476 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.75708 | 4.87903 | 5.24414 | 5.38088 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.213749 | 0.244871 | 0.325186 | 0.591353 |
CDS Structure of MLOC_53111
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53111.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g17500.1 |
-2 |
5e-47 |
172 |
119/231 (52%) |
13103.m02088 protein expressed protein |
| TAIR PP10 |
AT2G37300.1 |
-2 |
1e-16 |
79 |
35/63 (56%) |
unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 19; Plants - 25; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). | chr2:15662845-15663547 REVERSE LENGTH=169 |