MLOC_53088 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.516750.605470.9507281.3764
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.1128950.1276130.009372180
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.604360.9803291.026760.676269
NODDeveloping tillers at six leaf stage, 3rd internode00.3093740.003413150
CAR5Developing grain, bracts removed (5 DPA)0.3063610.5994940.4043860.00938307
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_53088






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53088.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375471NoneNoneNoneNone
MLOC_53088.1CUST_3049_PI427708080AvailableAvailablecontig_38043 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g01470.1 -2 9e-148 454 260/302 (86%) 13106.m00050 protein AGAP000326-PA, putative, expressed
TAIR PP10 AT1G62730.1 -2 1e-97 317 191/303 (63%) Terpenoid synthases superfamily protein | chr1:23229204-23230118 REVERSE LENGTH=304