- Predicted Gene MLOC_53078
MLOC_53078 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53078_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53078_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.31801 | 7.77003 | 3.80131 | 5.09219 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.03438 | 6.74891 | 2.28451 | 3.43699 |
INF1 | Young developing inflorescences (5mm) | 3.60189 | 5.05035 | 5.91473 | 3.29997 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.96238 | 2.29869 | 2.23722 | 2.45666 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.954 | 10.5473 | 10.5768 | 11.3954 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.76699 | 2.56848 | 6.0183 | 8.69138 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.87671 | 3.02152 | 3.94932 | 2.3778 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.53701 | 3.30069 | 4.56913 | 6.90235 |
CDS Structure of MLOC_53078
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53078.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g39670.1 |
+1 |
9e-13 |
66 |
31/38 (82%) |
13109.m03985 protein oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed |
TAIR PP10 | None | - | - | - | - | - |