MLOC_53078 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.318017.770033.801315.09219
LEAShoots from the seedlings (10 cm shoot stage)5.034386.748912.284513.43699
INF1Young developing inflorescences (5mm)3.601895.050355.914733.29997
INF2Developing inflorescences (1-1.5 cm)2.962382.298692.237222.45666
ROORoots from the seedlings (10 cm shoot stage)14.95410.547310.576811.3954
NODDeveloping tillers at six leaf stage, 3rd internode5.766992.568486.01838.69138
CAR5Developing grain, bracts removed (5 DPA)1.876713.021523.949322.3778
CAR15Developing grain, bracts removed (15 DPA)3.537013.300694.569136.90235



CDS Structure of MLOC_53078






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53078.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_53078.1CUST_12732_PI427708083AvailableAvailablecontig_38036 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g39670.1 +1 9e-13 66 31/38 (82%) 13109.m03985 protein oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed
TAIR PP10None-----