- Predicted Gene MLOC_53077
MLOC_53077 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53077_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53077_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 13.818 | 16.0634 | 16.6789 | 17.5339 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.2201 | 5.68735 | 5.39529 | 7.15433 |
INF1 | Young developing inflorescences (5mm) | 39.4696 | 43.0617 | 46.9392 | 39.6014 |
INF2 | Developing inflorescences (1-1.5 cm) | 73.6797 | 66.3385 | 72.6985 | 83.5213 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.3366 | 17.0183 | 16.7237 | 22.3619 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.3807 | 17.5007 | 18.941 | 65.8691 |
CAR5 | Developing grain, bracts removed (5 DPA) | 26.8134 | 27.0859 | 27.834 | 29.2751 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.2724 | 9.8368 | 9.39253 | 24.8027 |
CDS Structure of MLOC_53077
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53077.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g39660.2 |
+3 |
0.0 |
613 |
339/537 (63%) |
13109.m03984 protein ZOS9-21 - C2H2 zinc finger protein, expressed |
TAIR PP10 |
AT4G25610.1 |
+3 |
2e-90 |
298 |
199/522 (38%) |
C2H2-like zinc finger protein | chr4:13063801-13066860 FORWARD LENGTH=586 |