- Predicted Gene MLOC_53069
MLOC_53069 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 42.3821 | 51.7148 | 48.6289 | 38.6172 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 41.2167 | 40.5155 | 34.4977 | 27.2136 |
| INF1 | Young developing inflorescences (5mm) | 29.3214 | 35.9708 | 37.1636 | 21.6516 |
| INF2 | Developing inflorescences (1-1.5 cm) | 23.6562 | 24.2647 | 21.9096 | 21.3836 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 33.1141 | 21.1358 | 14.0203 | 22.4032 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 19.9608 | 25.4756 | 36.4677 | 69.1264 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 31.1647 | 34.0163 | 31.4261 | 24.5567 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 14.8553 | 14.8235 | 14.2995 | 25.4603 |
CDS Structure of MLOC_53069
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53069.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g47540.5 |
+3 |
2e-26 |
102 |
46/49 (94%) |
13105.m10409 protein CPuORF26 - conserved peptide uORF-containing transcript, expressed |
| TAIR PP10 |
AT3G18000.1 |
+3 |
2e-22 |
92 |
41/49 (84%) |
| Symbols: NMT1, XPL1, PEAMT | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:6154578-6157331 FORWARD LENGTH=491 |