- Predicted Gene MLOC_53060
MLOC_53060 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 327.893 | 155.765 | 170.388 | 206.523 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 91.6882 | 66.7673 | 98.4393 | 70.4743 |
| INF1 | Young developing inflorescences (5mm) | 253.57 | 241.028 | 243.99 | 220.554 |
| INF2 | Developing inflorescences (1-1.5 cm) | 197.74 | 178.148 | 191.596 | 217.33 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 223.099 | 179.683 | 173.845 | 215.922 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.3662 | 10.5985 | 29.4548 | 41.3034 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 136.683 | 142.419 | 142.956 | 146.334 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 33.0481 | 29.3903 | 24.0984 | 74.1332 |
CDS Structure of MLOC_53060
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53060.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g27769.1 |
+3 |
1e-48 |
157 |
85/86 (99%) |
13102.m03030 protein 40S ribosomal protein S27, putative, expressed |
| TAIR PP10 |
AT3G61110.1 |
+3 |
8e-47 |
152 |
80/86 (93%) |
| Symbols: ARS27A, RS27A | ribosomal protein S27 | chr3:22611710-22612632 FORWARD LENGTH=86 |