- Predicted Gene MLOC_53047
MLOC_53047 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 60.7266 | 63.4547 | 55.7354 | 79.4072 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 47.7442 | 44.6295 | 44.1569 | 46.7809 |
| INF1 | Young developing inflorescences (5mm) | 80.2558 | 91.1709 | 89.8045 | 94.5383 |
| INF2 | Developing inflorescences (1-1.5 cm) | 108.902 | 116.333 | 106.752 | 161.206 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 50.4627 | 71.2751 | 60.6873 | 116.534 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 31.1381 | 43.8027 | 47.9938 | 195.891 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 46.1587 | 48.4367 | 38.2257 | 59.8545 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 13.9467 | 12.5088 | 11.1847 | 38.3969 |
CDS Structure of MLOC_53047
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53047.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g12530.1 |
+1 |
1e-120 |
358 |
202/257 (79%) |
13106.m01368 protein CS domain containing protein, putative, expressed |
| TAIR PP10 |
AT5G53400.1 |
+1 |
1e-83 |
262 |
122/168 (73%) |
| Symbols: BOB1 | HSP20-like chaperones superfamily protein | chr5:21661588-21663383 FORWARD LENGTH=304 |