MLOC_53046 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.44277.179778.174410
LEAShoots from the seedlings (10 cm shoot stage)8.126126.797516.85690
INF1Young developing inflorescences (5mm)10.69029.39621.65420
INF2Developing inflorescences (1-1.5 cm)10.270612.03349.963650
ROORoots from the seedlings (10 cm shoot stage)9.249084.3690210.06550
NODDeveloping tillers at six leaf stage, 3rd internode6.866269.264457.050250
CAR5Developing grain, bracts removed (5 DPA)13.712610.38099.27690
CAR15Developing grain, bracts removed (15 DPA)7.060635.8007816.11530



CDS Structure of MLOC_53046






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK360084
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360084CUST_24291_PI427708080NoneNoneNone
MLOC_26120.1NoneAvailableNonecontig_1736973 (Not mapped)
MLOC_26276.1NoneAvailableNonecontig_174584 (Mapped)
MLOC_28175.1NoneAvailableNonecontig_1897748 (Not mapped)
MLOC_44466.1NoneAvailableNonecontig_27478 (Not mapped)
MLOC_46687.1NoneAvailableNonecontig_29425 (Mapped)
MLOC_48283.1NoneAvailableNonecontig_320622 (Not mapped)
MLOC_53046.1NoneAvailableNonecontig_380162 (Mapped)
MLOC_54800.1NoneAvailableNonecontig_394111 (Not mapped)
MLOC_78810.2NoneAvailableAvailablecontig_8200 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----