MLOC_53030 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2168221.059040.8811780.807199
LEAShoots from the seedlings (10 cm shoot stage)7.2630410.94636.832916.35221
INF1Young developing inflorescences (5mm)0.4565860.2152940.8184810.450984
INF2Developing inflorescences (1-1.5 cm)0.2576370.04863430.05768140.145151
ROORoots from the seedlings (10 cm shoot stage)0.2831570.2358720.4590990.311644
NODDeveloping tillers at six leaf stage, 3rd internode0.8107140.2620271.366771.24448
CAR5Developing grain, bracts removed (5 DPA)0.647150.8603480.6398680.716091
CAR15Developing grain, bracts removed (15 DPA)1.720020.8500411.122873.19684



CDS Structure of MLOC_53030






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53030.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_53030.1NoneAvailableAvailablecontig_37999 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----