MLOC_53018 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.324923.009721.134417.7179
LEAShoots from the seedlings (10 cm shoot stage)35.907839.950241.284929.6691
INF1Young developing inflorescences (5mm)14.199314.439713.991810.1562
INF2Developing inflorescences (1-1.5 cm)13.11615.015413.693613.0764
ROORoots from the seedlings (10 cm shoot stage)10.068422.052819.765520.6797
NODDeveloping tillers at six leaf stage, 3rd internode30.331440.338153.174130.005
CAR5Developing grain, bracts removed (5 DPA)38.646135.10639.793530.6898
CAR15Developing grain, bracts removed (15 DPA)21.619919.698820.89840.1025



CDS Structure of MLOC_53018






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53018.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372608NoneNoneNoneNone
MLOC_53018.1CUST_3041_PI427708080AvailableAvailablecontig_37993 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g47530.1 -1 0.0 677 362/414 (87%) 13107.m05065 protein AAA-type ATPase family protein, putative, expressed
TAIR PP10 AT4G02480.1 -1 0.0 604 321/413 (78%) AAA-type ATPase family protein | chr4:1082082-1088680 REVERSE LENGTH=1265