- Predicted Gene MLOC_53018
MLOC_53018 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53018_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53018_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 15.3249 | 23.0097 | 21.1344 | 17.7179 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 35.9078 | 39.9502 | 41.2849 | 29.6691 |
INF1 | Young developing inflorescences (5mm) | 14.1993 | 14.4397 | 13.9918 | 10.1562 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.116 | 15.0154 | 13.6936 | 13.0764 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.0684 | 22.0528 | 19.7655 | 20.6797 |
NOD | Developing tillers at six leaf stage, 3rd internode | 30.3314 | 40.3381 | 53.174 | 130.005 |
CAR5 | Developing grain, bracts removed (5 DPA) | 38.6461 | 35.106 | 39.7935 | 30.6898 |
CAR15 | Developing grain, bracts removed (15 DPA) | 21.6199 | 19.6988 | 20.898 | 40.1025 |
CDS Structure of MLOC_53018
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53018.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g47530.1 |
-1 |
0.0 |
677 |
362/414 (87%) |
13107.m05065 protein AAA-type ATPase family protein, putative, expressed |
TAIR PP10 |
AT4G02480.1 |
-1 |
0.0 |
604 |
321/413 (78%) |
AAA-type ATPase family protein | chr4:1082082-1088680 REVERSE LENGTH=1265 |