- Predicted Gene MLOC_53016
MLOC_53016 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_53016_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_53016_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.04663 | 3.20291 | 2.65158 | 3.65647 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.690406 | 1.0793 | 1.58556 | 1.49544 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0100462 | 0.0140748 | 0.0609042 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0.0484094 | 0.124896 |
CDS Structure of MLOC_53016
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_53016.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g47540.1 |
+3 |
1e-81 |
251 |
137/205 (67%) |
13107.m05066 protein DUF567 domain containing protein, putative, expressed |
TAIR PP10 |
AT3G14260.1 |
+3 |
1e-36 |
132 |
76/191 (40%) |
Protein of unknown function (DUF567) | chr3:4747986-4748779 REVERSE LENGTH=230 |