MLOC_53016 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.046633.202912.651583.65647
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.6904061.07931.585561.49544
NODDeveloping tillers at six leaf stage, 3rd internode00.01004620.01407480.0609042
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)000.04840940.124896



CDS Structure of MLOC_53016






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53016.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367165NoneNoneNoneNone
MLOC_53016.1CUST_3040_PI427708080AvailableAvailablecontig_37993 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g47540.1 +3 1e-81 251 137/205 (67%) 13107.m05066 protein DUF567 domain containing protein, putative, expressed
TAIR PP10 AT3G14260.1 +3 1e-36 132 76/191 (40%) Protein of unknown function (DUF567) | chr3:4747986-4748779 REVERSE LENGTH=230