MLOC_53007 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.01870780.08420070.07032120.0767724
LEAShoots from the seedlings (10 cm shoot stage)10.653827.075632.828720.4557
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.01397970.040136400.0437386
ROORoots from the seedlings (10 cm shoot stage)0.4651040.2005080.6932460.346012
NODDeveloping tillers at six leaf stage, 3rd internode0.4182820.3805982.926352.72576
CAR5Developing grain, bracts removed (5 DPA)0.7670790.4850630.8292590.707265
CAR15Developing grain, bracts removed (15 DPA)0.5733670.4751140.5100541.30957



CDS Structure of MLOC_53007






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_53007.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248259.1NoneNoneNoneNone
MLOC_53007.1CUST_18090_PI427708080AvailableAvailablecontig_37984 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g20090.1 +1 0.0 1028 521/754 (69%) 13110.m01637 protein CSLH1 - cellulose synthase-like family H, expressed
TAIR PP10 AT2G32540.1 +1 0.0 573 322/731 (44%) | Symbols: ATCSLB04, CSLB04, ATCSLB4 | cellulose synthase-like B4 | chr2:13814686-13818289 FORWARD LENGTH=755