MLOC_52978 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.870431.228725.69790
LEAShoots from the seedlings (10 cm shoot stage)22.426522.087618.06050
INF1Young developing inflorescences (5mm)45.043345.965340.24330
INF2Developing inflorescences (1-1.5 cm)54.828254.079449.72250
ROORoots from the seedlings (10 cm shoot stage)8.486125.022814.810
NODDeveloping tillers at six leaf stage, 3rd internode12.74410.398310.38930
CAR5Developing grain, bracts removed (5 DPA)35.668535.225234.83730
CAR15Developing grain, bracts removed (15 DPA)15.117514.484912.20610



CDS Structure of MLOC_52978






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK253060.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK253060.1CUST_19228_PI427708080NoneNoneNone
MLOC_52978.2NoneAvailableNonecontig_37950 (Mapped)
MLOC_72152.2NoneAvailableAvailablecontig_61155 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----