MLOC_52976 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6810160.2892820.4580591.7262
LEAShoots from the seedlings (10 cm shoot stage)002.25511.49313
INF1Young developing inflorescences (5mm)0.6092050.3028991.136231.61104
INF2Developing inflorescences (1-1.5 cm)0.935180.2159270.3266882.41433
ROORoots from the seedlings (10 cm shoot stage)001.063681.75472
NODDeveloping tillers at six leaf stage, 3rd internode00.2107620.6628223.28232
CAR5Developing grain, bracts removed (5 DPA)0.61322800.3428911.48987
CAR15Developing grain, bracts removed (15 DPA)0001.0917



CDS Structure of MLOC_52976






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52976.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52976.1CUST_12727_PI427708083AvailableAvailablecontig_379487 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g01060.1 +2 2e-20 87 41/46 (89%) 13105.m00018 protein expressed protein
TAIR PP10None-----