MLOC_52963 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.09220.9250552.178641.37102
LEAShoots from the seedlings (10 cm shoot stage)2.268281.327980.6816311.14965
INF1Young developing inflorescences (5mm)0.6255090.4772820.221280.368841
INF2Developing inflorescences (1-1.5 cm)0.2430350.07573780.2988840.211953
ROORoots from the seedlings (10 cm shoot stage)17.53584.140055.677686.79474
NODDeveloping tillers at six leaf stage, 3rd internode4.75316.139047.8654416.6446
CAR5Developing grain, bracts removed (5 DPA)0.286250.1767790.09946580.172407
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_52963






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_52963.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_52963.1CUST_17731_PI427708080AvailableAvailablecontig_37937 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g46200.1 -2 4e-23 95 48/53 (91%) 13103.m04971 protein acetyltransferase, GNAT family, putative, expressed
TAIR PP10 AT2G32030.1 -2 8e-14 67 34/56 (61%) Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr2:13632675-13633241 REVERSE LENGTH=188