- Predicted Gene MLOC_52962
MLOC_52962 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 29.021 | 21.7827 | 27.463 | 24.6065 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 15.8934 | 18.9815 | 16.9467 | 13.8532 |
| INF1 | Young developing inflorescences (5mm) | 17.9544 | 20.6718 | 18.1112 | 17.4106 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.0227 | 15.5226 | 16.7708 | 18.0477 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 56.2092 | 35.4184 | 53.3503 | 44.608 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 102.556 | 101.458 | 89.1195 | 275.133 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.7536 | 12.8661 | 12.101 | 12.6075 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.19889 | 1.532 | 2.07182 | 4.89178 |
CDS Structure of MLOC_52962
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52962.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g46260.1 |
+3 |
2e-121 |
366 |
199/258 (77%) |
13103.m04976 protein DUF581 domain containing protein, expressed |
| TAIR PP10 |
AT3G22550.1 |
+3 |
3e-29 |
118 |
88/230 (38%) |
Protein of unknown function (DUF581) | chr3:7991827-7992805 REVERSE LENGTH=267 |