MLOC_52961 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.788834.851522.854333.48276
LEAShoots from the seedlings (10 cm shoot stage)3.799183.745424.27552.83703
INF1Young developing inflorescences (5mm)7.143476.376198.220986.2345
INF2Developing inflorescences (1-1.5 cm)10.50399.951715.242912.9839
ROORoots from the seedlings (10 cm shoot stage)1.737354.15324.879524.05315
NODDeveloping tillers at six leaf stage, 3rd internode3.821256.091278.412814.7269
CAR5Developing grain, bracts removed (5 DPA)12.088514.472910.547312.6671
CAR15Developing grain, bracts removed (15 DPA)3.34671.917432.38246.33823



CDS Structure of MLOC_52961






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364479
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364479CUST_20915_PI427708080NoneNoneNone
MLOC_28948.1NoneAvailableNonecontig_1961562 (Not mapped)
MLOC_32479.1NoneAvailableNonecontig_228951 (Mapped)
MLOC_46923.1NoneAvailableNonecontig_297807 (Not mapped)
MLOC_52961.1NoneAvailableAvailablecontig_379365 (Mapped)
MLOC_7249.1NoneAvailableNonecontig_1388630 (Not mapped)
MLOC_79775.1NoneAvailableNonecontig_86906 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----