- Predicted Gene MLOC_52954
MLOC_52954 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_52954_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_52954_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.821546 | 0.857759 | 0.959497 | 0.862819 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.778732 | 0.345668 | 0.282387 | 0.412189 |
INF1 | Young developing inflorescences (5mm) | 0.729249 | 0.620697 | 0.692334 | 0.544838 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.0828 | 0.97636 | 0.997884 | 1.09187 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.236402 | 0.216375 | 0.573963 | 0.310134 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.838702 | 0.522746 | 0.44712 | 1.74817 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.698195 | 0.594261 | 0.705786 | 0.629518 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.200805 | 0.142301 | 0.249171 | 0.410375 |
CDS Structure of MLOC_52954
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52954.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g43760.1 |
+3 |
7e-84 |
278 |
166/229 (72%) |
13108.m04742 protein carrier, putative, expressed |
TAIR PP10 |
AT2G17080.1 |
+2 |
4e-19 |
91 |
74/253 (29%) |
Arabidopsis protein of unknown function (DUF241) | chr2:7433326-7434117 REVERSE LENGTH=263 |