- Predicted Gene MLOC_52950
MLOC_52950 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.04992 | 6.84947 | 6.80426 | 6.75494 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.89486 | 7.79503 | 7.40394 | 6.86276 |
| INF1 | Young developing inflorescences (5mm) | 11.0131 | 12.0724 | 10.6751 | 9.79695 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.8119 | 15.9673 | 13.5393 | 16.5909 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.50256 | 7.39332 | 7.24032 | 9.37415 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.9522 | 5.50978 | 6.14428 | 19.4241 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.5764 | 11.2072 | 11.7211 | 11.5667 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.68029 | 4.98502 | 5.15669 | 12.4907 |
CDS Structure of MLOC_52950
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52950.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g53590.2 |
-2 |
0.0 |
861 |
435/708 (61%) |
13103.m05851 protein expressed protein |
| TAIR PP10 |
AT1G05410.1 |
-2 |
9e-108 |
348 |
191/485 (39%) |
Protein of unknown function (DUF1423) | chr1:1585504-1587268 REVERSE LENGTH=471 |