MLOC_5295 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1281030.6638650.4444220.366384
LEAShoots from the seedlings (10 cm shoot stage)0.3803170.5881020.4563950.344878
INF1Young developing inflorescences (5mm)1.866750.5865910.6394010.805206
INF2Developing inflorescences (1-1.5 cm)0.5703690.4295580.6373970.48811
ROORoots from the seedlings (10 cm shoot stage)0.08962940.5016930.261040.393872
NODDeveloping tillers at six leaf stage, 3rd internode0.3385380.5623950.1667921.39455
CAR5Developing grain, bracts removed (5 DPA)1.427021.211020.8413930.957716
CAR15Developing grain, bracts removed (15 DPA)0.5227010.6882190.3421221.0071



CDS Structure of MLOC_5295






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_5295.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_5295.1CUST_13006_PI427708080AvailableAvailablecontig_136107 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g33040.1 +2 0.0 629 346/880 (39%) 13110.m02903 protein receptor-like protein kinase precursor, putative, expressed
TAIR PP10 AT4G08850.2 +2 0.0 669 375/932 (40%) Leucine-rich repeat receptor-like protein kinase family protein | chr4:5637467-5640496 REVERSE LENGTH=1009