- Predicted Gene MLOC_52949
MLOC_52949 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.65628 | 2.77138 | 2.55452 | 3.20516 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.918883 | 0.0522853 | 0.161235 | 0.297831 |
| INF1 | Young developing inflorescences (5mm) | 9.48663 | 10.1501 | 9.66381 | 9.22591 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.12212 | 9.12148 | 7.01435 | 9.88229 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.09265 | 2.26265 | 2.94461 | 2.78195 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0192646 | 0.0221303 | 0.0975681 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.73321 | 1.58765 | 2.00292 | 1.99469 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.16748 | 0.0410272 | 0.240568 | 0.366616 |
CDS Structure of MLOC_52949
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_52949.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g53580.1 |
+1 |
2e-115 |
349 |
225/323 (70%) |
13103.m05850 protein expressed protein |
| TAIR PP10 |
AT1G05440.1 |
+1 |
1e-30 |
123 |
71/182 (39%) |
C-8 sterol isomerases | chr1:1596374-1597843 REVERSE LENGTH=384 |